Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949414.1_cds_XP_016490321.1_80753
CDS Infomation

[gene=LOC107810097] [db_xref=GeneID:107810097] [protein=glucan endo-1,3-beta-glucosidase-like] [protein_id=XP_016490321.1] [location=join(36052..37128,37268..37646,38509..38537)] [gbkey=CDS]
Sequence

ATGGAGATGTCTAACAAAAAAACATCTCCATTCCTTTCCTTCTTGTTCATTTCAGCTATC
TTTATTCAATGTTTTCCTTATGTTTCCTCCATAGGTGTTAACTATGGCACCCTTGGCAAC
AACCTACCTCCACCATCTCAAGTTGCTCAATTTCTCAAAGACAAAACCATAATCGACAAA
ATCAAGATTTTCGACGTTAATCCAGATATCTTAAGAGCTTTTGCCAACACAGGAATCTCA
GTTACTGTCACTGTCCCAAATGGTGAAATTCCCAAATTGTTGGACATAGGCTATGCTAAG
AGTTATGTGGAAGCAAATATTAAGCCATTTTACCCACAAACCAAAATTGATGTTATTGCT
ATAGGAAATGAGATTCTCCATTGGGAAACACCAGAAGTACAAAATAAATTAGTCCCTGCT
ATGAGGACCTTTTATCAAGCACTAATTCAATCTGGTATTAATACAATCAAAGTATCAACA
CCACATTCTTTAGGAATTTTATTATCATCAAATCCACCAAGTATGGCAAAATTTAGACCA
GGATGGGATGTTGGTATTTTAGCACCAATGTTACAATTTTTACGCGAAACGAAAGGACCT
TTTATGGTGAATCCATATCCATATTTTGCTTACAATCCACAAGAAGTTGATTTCCTTTTG
TTTAAGCAAAACAAGGGAGTTTTTGATAGGTTTACAAAGAAATTGTACACAAACATGTTC
GATATGTTATTAGATGCTGTGTATATGTCAATGAAGAGACTTGGATATGGAGATGTGGAA
ATTATTGCAGCTGAAACAGGGTGGCCTTCTTTAGGTGAAAGTTTTGAGCCACAATGTACT
GTGGAAAATGCAGCTTCTTATAATGGTGGATTGCTTAGGAAATATGTTTCTGGGGCAGGG
ACACCATTAATGCCACATAAGAAGATTGAGACTTATATTTTTGGTTTGTTTAATGAGAAT
ACTAAACCAGGTTCTGCTGCTGAGAGGAATTTTGGATTGTTTAGGCCTGATTTTACACAA
GTGTATAGTATTGGAATCATGAAAGGAGAGCCATTGCCACTGCCACTGCCACCAAAGCCT
CTTCCACAACCAGCATTGCCACAACCACAGCCATTGCCAAGAGGCCGAAGACACCCCGCA
AAGCCTCATGTTCCAAGACCAGGAAAGCCAGCGCTAAAACTCCCTGCACAGCCAATTCCA
AAACCAGTTCTAGGCAAGAAATTTTGCATGCCAAAGCCAGAGGCAACAGATGCACAATTA
CAAGCCAATTTAGACTGGATATGCACTAATCAAGGTGTGGACTGCCGCCCTGTTCAAGTT
GGAGGTCTTTGCTTTAACCCCAACACTGTTAGATCTCATGCTTCCTTTGTCATGAATTCT
TACTATCAAAGTAAGGGCCGCAACGACTTCAACTGTGATTTTTCGGGCTCTGCTGTCATC
GTCTTTGCTGATCCAAGTTATGGTACATGCAAATACCTATCTTGA

Peptide Sequence

PEP ID

XP_016490321.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase-like [Nicotiana tabacum]
Sequence

MEMSNKKTSPFLSFLFISAIFIQCFPYVSSIGVNYGTLGNNLPPPSQVAQFLKDKTIIDK
IKIFDVNPDILRAFANTGISVTVTVPNGEIPKLLDIGYAKSYVEANIKPFYPQTKIDVIA
IGNEILHWETPEVQNKLVPAMRTFYQALIQSGINTIKVSTPHSLGILLSSNPPSMAKFRP
GWDVGILAPMLQFLRETKGPFMVNPYPYFAYNPQEVDFLLFKQNKGVFDRFTKKLYTNMF
DMLLDAVYMSMKRLGYGDVEIIAAETGWPSLGESFEPQCTVENAASYNGGLLRKYVSGAG
TPLMPHKKIETYIFGLFNENTKPGSAAERNFGLFRPDFTQVYSIGIMKGEPLPLPLPPKP
LPQPALPQPQPLPRGRRHPAKPHVPRPGKPALKLPAQPIPKPVLGKKFCMPKPEATDAQL
QANLDWICTNQGVDCRPVQVGGLCFNPNTVRSHASFVMNSYYQSKGRNDFNCDFSGSAVI
VFADPSYGTCKYLS

Transcript Sequence

Gene sequence data has not been registered.